Object-oriented biological system integration: a SARS coronavirus example |
| |
Authors: | Shegogue Daniel Zheng W Jim |
| |
Affiliation: | Department of Biostatistics, Bioinformatics and Epidemiology, Medical University of South Carolina, 135 Cannon Street, PO Box 250835, Charleston, SC 29425, USA. |
| |
Abstract: | MOTIVATION: The importance of studying biology at the system level has been well recognized, yet there is no well-defined process or consistent methodology to integrate and represent biological information at this level. To overcome this hurdle, a blending of disciplines such as computer science and biology is necessary. RESULTS: By applying an adapted, sequential software engineering process, a complex biological system (severe acquired respiratory syndrome-coronavirus viral infection) has been reverse-engineered and represented as an object-oriented software system. The scalability of this object-oriented software engineering approach indicates that we can apply this technology for the integration of large complex biological systems. AVAILABILITY: A navigable web-based version of the system is freely available at http://people.musc.edu/~zhengw/SARS/Software-Process.htm |
| |
Keywords: | |
本文献已被 PubMed Oxford 等数据库收录! |
|