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The assessment of DNA from marine organisms via a modified salting-out protocol
Authors:Giovanni Battista Ferrara  Barbara Murgia  Anna Maria Parodi  Laura Valisano  Carlo Cerrano  Giulio Palmisano  Giorgio Bavestrello  Michele Sara
Institution:(1) Dipartimento di Biologia, Università di Genova, Viale Benedetto XV, 16132 Genova, Italy;(2) Dipartimento per lo studio del Territorio e delle sue Risorse, Università di Genova, Corso Europa 26, 16132 Genova, Italy;(3) Dipartimento di Scienze del Mare, Università Politecnica delle Marche, Via Brecce Bianche, 60131 Ancona, Italy
Abstract:We developed a rapid, practical and non-toxic salting-out method for the extraction of DNA from marine organisms, and tested it on two representative species of Porifera and Cnidaria, both living in association with symbiotic zooxanthellae. We tested the efficiency of the protocol by comparing the output of the method for fresh tissue, frozen tissue and tissue stored in ethanol. It proved to be effective for extracting DNA in the case of the methods of preservation considered here, and for obtaining quantities of DNA comparable to those obtained via the traditional approach. The DNA from both species was of good quality. The DNA obtained was amplified by PCR using specific primers for the large ribosomal subunit, allowing the identification of the presence of both the host and symbiont genomes.
Keywords:Symbiodinium  Porifera  Cnidaria  DNA  PCR
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