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Secale cereale inter-microsatellites (SCIMs): chromosomal location and genetic inheritance
Authors:M.?V.?Camacho,M.?Matos,C.?González,V.?Pérez-Flores,B.?Pernaute,O.?Pinto-Carnide,C.?Benito  author-information"  >  author-information__contact u-icon-before"  >  mailto:cebe@bio.ucm.es"   title="  cebe@bio.ucm.es"   itemprop="  email"   data-track="  click"   data-track-action="  Email author"   data-track-label="  "  >Email author
Affiliation:(1) Departamento de Genética, Facultad de Biología, Universidad Complutense, 28040 Madrid, Spain;(2) Centro de Genética e Biotecnologia (CGB-UTAD), Universidade de Trás-os-Montes e, Alto Douro, Apartado 1013, 5000-911 Vila Real, Portugal
Abstract:The polymerase chain reaction (PCR) was used to locate Secale cereale (inter-simple sequence repeat ISSR) or Secale cereale inter-microsatellite (SCIM) markers using wheat–rye addition lines in order to develop a set of molecular markers distributed on the seven rye chromosomes. The number of SCIM markers located on 1R, 2R, 3R, 4R, 5R, 6R and 7R chromosomes were 4, 3, 12, 3, 2, 9 and 8, respectively. Therefore, a total of 41 new SCIMs were located on the seven rye chromosomes. The segregation of the 63 different SCIM markers in three different F2 was studied. The observed ISSR segregations were the 3:1 (50.7%), the 15:1 (12.7%) and the 1:1 (14.2%). The linkage analysis carried out indicated that seven of the segregating SCIMs were linked to chromosome 7R and two were linked to chromosome 4R. The use of the SCIM markers as a source of molecular markers that could be linked to interesting genes or other important agronomic traits is discussed.
Keywords:chromosomal location  inheritance  ISSR  linkage map  Secale cereale
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