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A simulation support system for solving large physiological models on microcomputers
Institution:1. Institute of Cognitive Neuroscience, University College London, UK;2. Division of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK;3. Department of Neurology, UCSF School of Medicine San Francisco, CA, USA;4. Virginia Tech Carilion Research Institute Roanoke, VA, USA;5. Department of Neurology, Harvard Medical School Boston, MA, USA;6. Department of Psychological & Brain Sciences, University of California, Santa Barbara, California, USA
Abstract:Although physiological modeling and computer simulation have become useful research tools to test new scientific theories and to design and analyze laboratory experiments, developing a new model can be a tedious process because the investigator must often write very complex and specific routines for data input and output. To facilitate the design of new models (as well as the use of existing models), we have developed MODSIM, a FORTRAN-based simulation support system for the IBM PC computer than can accommodate very large dynamic models having up to several thousand equations. It provides the investigator with utilities for continuous on-line graphical and/or tubular output, as well as facilities for dynamic interaction with the model. The user must only supply a model as a list of mathematical equations written in FORTRAN, along with the initial values of the model variables and parameters. The model is precompiled, compiled, and then linked to the MODSIM utilities. Without further programming, the user can then solve the model, select variables for graphical output, and stop the model at any time to analyze the data or to change a parameter before resuming the simulation. This simulation system makes it very easy to develop new models that actively interact with the experimental research of the investigator.
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