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Urinary Peptidomic Analysis Identifies Potential Biomarkers for Acute Rejection of Renal Transplantation
Authors:Tara K Sigdel  Xuefeng B Ling  Ken H Lau  Li Li  James Schilling  Minnie M Sarwal
Institution:(1) Division of Nephrology, Department of Pediatrics, Stanford University Medical School, Stanford University, Stanford, CA 94305, USA;(2) Divisions of Immunology, Department of Pediatrics, Stanford University Medical School, Stanford University, Stanford, CA 94305, USA;(3) Stanford University Medical School, G306, 300 Pasteur Drive, Stanford, CA 94304, USA
Abstract:Introduction  Human urine is a complex matrix of proteins, endogenous peptides, lipids, and metabolites. The level of any or all of these components can reflect the pathophysiological status of an individual especially of the kidney at the time of urine collection. The naturally occurring endogenous urinary peptides which are thought to be the product of several proteolytic and degradation processes may provide clinically useful biomarkers for different renal and systemic diseases. Materials and Methods  To examine if specific differences in the urinary peptidome (<10 kDa) occur at the time of acute renal transplant rejection (AR), we undertook a study of urine samples collected from biopsy-proven AR (n = 10), stable graft function (n = 10), and healthy normal control (n = 10). The peptides (<10 kDa) were extracted and fractionated with high-performance liquid chromatography followed by matrix-assisted laser desorption/ionization (MALDI) time-of-flight mass spectrometric (MS) analysis. Results  We identified 54 endogenous peptides, including multiple peptides for Tamm–Horsfall protein (UMOD). A panel of peptides are identified which discriminate renal transplant patients with AR from stable graft. We have shown that liquid chromatography followed by MALDI is a useful tool to identify potential biomarkers, which after verification with larger patient cohort can be used as a non-invasive monitoring tool for renal transplant rejection.
Keywords:Urine  Peptidomics  Biomarker  Renal transplantation  Proteomics  LC MALDI  Urinary Peptidomics  Acute rejection  Non-invasive biomarkers  Biomarker discovery
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