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Network quantification of EGFR signaling unveils potential for targeted combination therapy
Authors:Franziska Witzel  Leanne Berry  Dirk Schumacher  Yibing Yan  Pawel Durek  Mark Merchant  Reinhold Schäfer  Christine Sers  Nils Blüthgen
Affiliation:1. Laboratory of Molecular Tumour Pathology, Institute of Pathology, Charité ‐ Universit?tsmedizin Berlin, , Berlin, Germany;2. Institute for Theoretical Biology, Humboldt University Berlin, , Berlin, Germany;3. Department of Translation Oncology, Genentech, Inc., , South San Francisco, CA, USA;4. Oncology Biomarker Development, Genentech, Inc., , South San Francisco, CA, USA;5. German Cancer Consortium (DKTK) and German Cancer Research Center (DKFZ), , Heidelberg, Germany
Abstract:The epidermal growth factor receptor (EGFR) signaling network is activated in most solid tumors, and small‐molecule drugs targeting this network are increasingly available. However, often only specific combinations of inhibitors are effective. Therefore, the prediction of potent combinatorial treatments is a major challenge in targeted cancer therapy. In this study, we demonstrate how a model‐based evaluation of signaling data can assist in finding the most suitable treatment combination. We generated a perturbation data set by monitoring the response of RAS/PI3K signaling to combined stimulations and inhibitions in a panel of colorectal cancer cell lines, which we analyzed using mathematical models. We detected that a negative feedback involving EGFR mediates strong cross talk from ERK to AKT. Consequently, when inhibiting MAPK, AKT activity is increased in an EGFR‐dependent manner. Using the model, we predict that in contrast to single inhibition, combined inactivation of MEK and EGFR could inactivate both endpoints of RAS, ERK and AKT. We further could demonstrate that this combination blocked cell growth in BRAF‐ as well as KRAS‐mutated tumor cells, which we confirmed using a xenograft model.
Keywords:cancer  EGFR signaling  mathematical modeling  modular response analysis  signal transduction
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