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Sulfolobus acidocaldarius DNA聚合酶IV跨越损伤合成能力的酶学特征
引用本文:王伟玮,王风平,刘喜朋.Sulfolobus acidocaldarius DNA聚合酶IV跨越损伤合成能力的酶学特征[J].微生物学报,2019,59(3):478-488.
作者姓名:王伟玮  王风平  刘喜朋
作者单位:上海交通大学生命科学技术学院, 微生物代谢国家重点实验室, 上海 200240,上海交通大学生命科学技术学院, 微生物代谢国家重点实验室, 上海 200240,上海交通大学生命科学技术学院, 微生物代谢国家重点实验室, 上海 200240
基金项目:国家自然科学基金(31371260)
摘    要:目的]以嗜酸嗜热硫化叶菌Sulfolobus acidocaldarius的DNA聚合酶IV (Saci_0554)为例,表征其跨越模板上损伤碱基的DNA合成效果。方法]将DNA聚合酶IV (SacpolIV)在大肠杆菌中进行重组表达,经亲和层析纯化得到SacpolIV蛋白;利用人工合成的带有不同损伤的寡核苷酸片段作为模板DNA,用尿素变性聚丙烯酰胺凝胶电泳技术,鉴定SacpolIV在体外跨越各种损伤碱基进行跨损伤合成的催化能力。结果]SacpolIV重组蛋白能够不同程度地跨越嘌呤和嘧啶损伤,跨越能力的高低取决于损伤碱基与正常碱基形成氢键的能力。本研究还发现,SacpolIV能够在DNA链中掺入核糖核苷酸,但掺入核糖核苷酸的效率低于脱氧核糖核苷酸。结论]本研究证实SacpolIV具有很强的跨越损伤合成能力,能够跨越多种氢键配对能力减弱的损伤碱基,为其在细胞内的跨越损伤合成功能提供了生化证据。

关 键 词:嗜热古菌  嗜酸嗜热硫化叶菌  DNA聚合酶IV  跨越损伤合成  损伤碱基
收稿时间:2018/4/23 0:00:00
修稿时间:2018/5/22 0:00:00

Enzymatic characterization of translesion synthesis by Sulfolobus acidocaldarius DNA polymerase IV
Weiwei Wang,Fengping Wang and Xipeng Liu.Enzymatic characterization of translesion synthesis by Sulfolobus acidocaldarius DNA polymerase IV[J].Acta Microbiologica Sinica,2019,59(3):478-488.
Authors:Weiwei Wang  Fengping Wang and Xipeng Liu
Institution:State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China,State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China and State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
Abstract:Objective] To characterize the translesion synthesis of different damages by DNA polymerase IV from thermophilic archaea Sulfolobus acidocaldarius. Methods] We detected the translesion synthesis ability of Sulfolobus acidocaldarius polymerase IV (SacpolIV) using fluorescence labeled oligonucleotides as substrates through denaturing polyacrylamide gel electrophoresis. Results] We successfully purified SacpolIV from induced E. coli and confirmed SacpolIV possessed strong translesion synthesis ability to DNA damages on purines and pyrimidines. The TLS ability depends on whether damaged bases can pair normal bases perfectly. Besides, we found SacpolIV can incorporate rNMP into DNA strand. Conclusion] We confirmed that SacpolIV is a typical TLS DNA polymerase with the abilities of bypassing damaged purines and pyrimidines on DNA, and incorporating rNMP into DNA.
Keywords:thermophilic archaea  Sulfolobus acidocaldarius  DNA polymerase IV  translesion synthesis  damaged bases
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