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Optimization strategies for metabolic networks
Authors:Alexandre Domingues  Susana Vinga  João M Lemos
Institution:1.INESC-ID - R,Lisboa,Portugal;2.FCM-UNL - C Mártires,Lisboa,Portugal;3.IST-UTL,Lisboa,Portugal
Abstract:

Background  

The increasing availability of models and data for metabolic networks poses new challenges in what concerns optimization for biological systems. Due to the high level of complexity and uncertainty associated to these networks the suggested models often lack detail and liability, required to determine the proper optimization strategies. A possible approach to overcome this limitation is the combination of both kinetic and stoichiometric models. In this paper three control optimization methods, with different levels of complexity and assuming various degrees of process information, are presented and their results compared using a prototype network.
Keywords:
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