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Production of RNA by a polymerase protein encapsulated within phospholipid vesicles
Authors:Ajoy C Chakrabarti  Ronald R Breaker  Gerald F Joyce  David W Deamer
Institution:(1) Department of Chemistry and Biochemistry, University of California, 95064 Santa Cruz, Santa Cruz, CA, USA;(2) Departments of Chemistry and Molecular Biology, The Scripps Research Institute, 10666 N. Torrey Pines Road, 92037 CA, La Jolla, USA
Abstract:Catalyzed polymerization reactions represent a primary anabolic activity of all cells. It can be assumed that early cells carried out such reactions, in which macromolecular catalysts were encapsulated within some type of boundary membrane. In the experiments described here, we show that a template-independent RNA polymerase (polynucleotide phosphorylase) can be encapsulated in dimyristoyl phosphatidylcholine vesicles without substrate. When the substrate adenosine diphosphate (ADP) was provided externally, long-chain RNA polymers were synthesized within the vesicles. Substrate flux was maximized by maintaining the vesicles at the phase transition temperature of the component lipid. A protease was introduced externally as an additional control. Free enzyme was inactivated under identical conditions. RNA products were visualized in situ by ethidium bromide fluorescence. The products were harvested from the liposomes, radiolabeled, and analyzed by polyacrylamide gel electrophoresis. Encapsulated catalysts represent a model for primitive cellular systems in which an RNA polymerase was entrapped within a protected microenvironment.Abbreviations ADP adenosine diphosphate - DMPC dimyristoyl phosphatidylcholine - EDTA ethylenediaminetetraacetic acid - LUV large unilamellar vesicle - MLV multilamellar vesicle - PAGE polyacrylamide gel electrophoresis - PNPase or PNP polynucleotide phosphorylase - SUV small unilamellar vesicle Correspondence to.: A.C. Chakrabarti
Keywords:RNA  Liposome  Biogenesis  Origin of life  Polynucleotide phosphorylase  Polymerase  Permeability
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