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Exploratory and inferential analysis of gene cluster neighborhood graphs
Authors:Theresa Scharl  Ingo Voglhuber and Friedrich Leisch
Institution:(1) Department of Statistics and Probability Theory, Vienna University of Technology, Wiedner Hauptstr. 8-10, A-1040 Vienna, Austria;(2) Department of Biotechnology, University of Natural Resources and Applied Life Sciences, Vienna, Muthgasse 18, A-1190, Vienna, Austria;(3) Department of Statistics, University of Munich, Ludwigstr. 33, D-80539, Munich, Germany
Abstract:

Background  

Many different cluster methods are frequently used in gene expression data analysis to find groups of co-expressed genes. However, cluster algorithms with the ability to visualize the resulting clusters are usually preferred. The visualization of gene clusters gives practitioners an understanding of the cluster structure of their data and makes it easier to interpret the cluster results.
Keywords:
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