VISTAL--a new 2D visualization tool of protein 3D structural alignments |
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| Authors: | Kolodny Rachel Honig Barry |
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| Affiliation: | Howard Hughes Medical Institute, Department of Biochemistry and Molecular Biophysics, Center for Computational Biology and Bioinformatics, Columbia University, 1130 St Nicholas Avenue, Room 815, New York, NY 10032, USA. |
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| Abstract: | We offer a tool, denoted VISTAL, for two-dimensional visualization of protein structural alignments. VISTAL describes aligned structures as a series of matched secondary structure elements, colored according to the three-dimensional distance of their Calpha atoms. AVAILABILITY: VISTAL can be downloaded from http://trantor.bioc.columbia.edu/~kolodny/software.html. |
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