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Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRP(T))
Authors:Alex Copeland  Ahmet Zeytun  Montri Yassawong  Matt Nolan  Susan Lucas  Nancy Hammon  Shweta Deshpande  Jan-Fang Cheng  Cliff Han  Roxanne Tapia  Lynne A Goodwin  Sam Pitluck  Konstantinos Mavromatis  Konstantinos Liolios  Ioanna Pagani  Natalia Ivanova  Natalia Mikhailova  Amrita Pati  Amy Chen  Krishna Palaniappan  Miriam Land  Loren Hauser  Cynthia D Jeffries  Evelyne-Marie Brambilla  Manfred Rohde  Johannes Sikorski  Rüdiger Pukall  Markus Göker  John C Detter  Tanja Woyke  James Bristow  Jonathan A Eisen  Victor Markowitz  Philip Hugenholtz  Nikos C Kyrpides  Hans-Peter Klenk  Alla Lapidus
Abstract:Deinococcus proteolyticus (ex Kobatake et al. 1973) Brook and Murray 1981 is one of currently 47 species in the genus Deinococcus within the family Deinococcaceae. Strain MRP(T) was isolated from feces of Lama glama and possesses extreme radiation resistance, a trait is shares with various other species of the genus Deinococcus, with D. proteolyticus being resistant up to 1.5 Mrad of gamma radiation. Strain MRP(T) is of further interest for its carotenoid pigment. The genome presented here is only the fifth completed genome sequence of a member of the genus Deinococcus (and the forth type strain) to be published, and will hopefully contribute to a better understanding of how members of this genus adapted to high gamma- or UV ionizing-radiation. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,886,836 bp long genome with its four large plasmids of lengths 97 kbp, 132 kbp, 196 kbp and 315 kbp harbors 2,741 protein-coding and 58 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Keywords:strictly aerobic   non-motile   chemoorganotrophic   proteolytic   radioresistant   mesophile   carotenoid pigments   tetrad-forming cocci   Gram-positive   Deinococcaceae   GEBA
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