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Biodegradation of polyhydroxyalkanoates by soil microbial communities of different structures and detection of PHA degrading microorganisms
Authors:A. N. Boyandin  S. V. Prudnikova  M. L. Filipenko  E. A. Khrapov  A. D. Vasil’ev  T. G. Volova
Affiliation:1. Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, building 50, Akademgorodok 50, Krasnoyarsk, 660036, Russia
2. Siberian Federal University, pr. Svobodny 79, Krasnoyarsk, 660041, Russia
3. Institute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, pr. Akademika Lavrent’eva 8, Novosibirsk, 630090, Russia
4. Kirenskii Institute of Physics, Siberian Branch, Russian Academy of Sciences, building 38, Akademgorodok 50, Krasnoyarsk, 660036, Russia
Abstract:Biodegradation of microbial linear polymers of hydroxyalkanoic acids (polyhydroxyalkanoates, PHAs) by soil microbial communities of different structures has been studied during two field seasons in different weather conditions. This process was shown to be influenced by the polymer chemical composition, temperature, humidity, and the microbial soil component. The PHA degradation was accompanied by a decrease in the polymer molecular weight and an increase in the degree of crystallinity, indicating the preferential destruction of the amorphous phase compared to the crystalline one. The quantity of the true PHA destructors developing at the surface of the polymer samples was lower than the quantity of accompanying bacteria. The dominant PHA degrading microorganisms under the test conditions were identified as bacteria of the genera Variovorax, Stenotrophomonas, Acinetobacter, Pseudomonas, Bacillus, and Xanthomonas and as micromycetes from Penicillium, Paecilomyces, Acremonium, Verticillium, and Zygosporium.
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