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Tau protein binds single-stranded DNA sequence specifically--the proof obtained in vitro with non-equilibrium capillary electrophoresis of equilibrium mixtures
Authors:Krylova Svetlana M  Musheev Michael  Nutiu Razvan  Li Yingfu  Lee Gloria  Krylov Sergey N
Institution:Department of Chemistry, York University, Toronto, Ont., Canada M3J 1P3.
Abstract:Tau is a microtubule-associated protein, which plays an important role in physiology and pathology of neurons. Tau has been recently reported to bind double-stranded DNA (dsDNA) but not to bind single-stranded DNA (ssDNA) Cell. Mol. Life Sci. 2003, 60, 413-421]. Here, we prove that tau binds not only dsDNA but also ssDNA. This finding was facilitated by using two kinetic capillary electrophoresis methods: (i) non-equilibrium capillary electrophoresis of equilibrium mixtures (NECEEM); (ii) affinity-mediated NECEEM. Using the new approach, we observed, for the first time, that tau could induce dissociation of strands in dsDNA by binding one of them in a sequence-specific fashion. Moreover, we determined the equilibrium dissociation constants for all tau-DNA complexes studied.
Keywords:EGTA  ethylene glycol-bis(β-aminoethyl ether)-N  N  N  N′-tetraacetic acid  EMSA  electrophoretic mobility shift assay  IPTG  isopropyl beta-d-thiogalactopyranoside  KCE  kinetic capillary electrophoresis  NECEEM  non-equilibrium capillary electrophoresis of equilibrium mixtures  PIPES  piperazine-N  N′-bis(2-ethanesulfonic acid)  PMSF  phenylmethylsulfonyl fluoride  SSB  single-stranded DNA binding protein  SweepCE  sweeping capillary electrophoresis  IS  internal standard
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