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Chemical dynamic approach to synergetics and instability in biological systems
Authors:K Shirane  T Tokimoto
Affiliation:1. Department of Colloid and Lipid Science, Gdańsk University of Technology, Narutowicza 11/12, 80-233 Gdańsk, Poland;2. STLO, UMR 1253, INRA, Agrocampus Ouest, 35000 Rennes, France;3. School of Food Science and Nutrition, University of Leeds, Leeds LS2 9JT, United Kingdom;4. Department of Applied Physics, University of Granada, 18071 Granada, Spain;5. Excellence Research Unit “Modeling Nature” (MNat), University of Granada, Granada, Spain;1. Department of Chemistry, Université du Québec à Montréal, and Ressources Aquatiques Québec, P.O. Box 8888, Downtown Station, Montréal H3C 3P8, Canada;2. Laboratoire de Biologie Physico-Chimique des Protéines Membranaires, CNRS, Université Paris Diderot and Institut de Biologie Physico-Chimique, 13 rue Pierre et Marie-Curie, 75005 Paris, France;3. Institut des Sciences de la Mer, Université du Québec à Rimouski, and Ressources Aquatiques Québec, 310 Allée des Ursulines, Rimouski, Québec G5L 3A1, Canada
Abstract:Based on Haken's theory, self-organization or synergetics is discussed using chemical dynamics to represent an autocatalytic reaction. In a simple case the changes in a self-organizing system are given by a set of two rate equations for a primary and a partial system. When these systems mutually form a feedback loop under the adiabatic condition, the rate equation of self-organization is described by a generalized Gibbs' free energy change delta U (delta x) followed by the reaction. The sign of the parameter k'3 (k0-kex; k0, kex: rate constants with or without an external stimulus) determines the instability of the coupled system in quasi-equilibrium (k'3 approximately greater than 0; k0 greater than kex). When the product exceeds the threshold (k'3 less than 0; k0 less than kex), the system transfers into a new state, or a phase transition appears. Considering the Boltzmann distribution, the transition parameter k'3 is evaluated by an average distribution of the states and the instability is discussed using the reaction velocities vqe and vqe in the quasi-equilibrium state. As an example of this model membrane excitation is discussed briefly.
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