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Evaluation of polymorphisms in microRNA‐binding sites and pancreatic cancer risk in Chinese population
Authors:Juntao Ke  Xiating Peng  Shufang Mei  Jianbo Tian  Pingting Ying  Nan Yang  Xiaoyang Wang  Danyi Zou  Yang Yang  Ying Zhu  Yajie Gong  Jing Gong  Rong Zhong  Jiang Chang  Zemin Fang  Xiaoping Miao
Abstract:As promising biomarkers and therapy targets, microRNAs (miRNAs) are involved in various physiological and tumorigenic processes. Genetic variants in miRNA‐binding sites can lead to dysfunction of miRNAs and contribute to disease. However, systematic investigation of the miRNA‐related single nucleotide polymorphisms (SNPs) for pancreatic cancer (PC) risk remains elusive. We performed integrative bioinformatics analyses to select 31 SNPs located in miRNA‐target binding sites using the miRNASNP v2.0, a solid database providing miRNA‐related SNPs for genetic research, and investigated their associations with risk of PC in two large case‐control studies totally including 1847 cases and 5713 controls. We observed that the SNP rs3802266 is significantly associated with increased risk of PC (odds ratio (OR) = 1.21, 95% confidence intervals (CI) = 1.11‐1.31, P = 1.29E‐05). Following luciferase reporter gene assays show that rs3802266‐G creates a stronger binding site for miR‐181a‐2‐3p in 3′ untranslated region (3′UTR) of the gene ZHX2. Expression quantitative trait loci (eQTL) analysis suggests that ZHX2 expression is lower in individuals carrying rs3802266‐G with increased PC risk. In conclusion, our findings highlight the involvement of miRNA‐binding SNPs in PC susceptibility and provide new clues for PC carcinogenesis.
Keywords:Chinese population  genome‐wide screening  microRNA‐binding sites  pancreatic cancer  polymorphisms
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