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Reactivity of asparagine residue at the active site of the D105N mutant of fluoroacetate dehalogenase from Moraxella sp. B
Authors:Susumu Ichiyama  Tatsuo Kurihara  Yoshifumi Kogure  Susumu Tsunasawa  Haruhiko Kawasaki  Nobuyoshi Esaki
Institution:1. Laboratory of Microbial Biochemistry, Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan;2. Biotechnology Research Laboratories, Takara Shuzo Co., Ltd., Kusatsu, Shiga 525-0055, Japan;3. Department of Agricultural Chemistry, University of Osaka Prefecture, Sakai, Osaka 599-8231, Japan
Abstract:Fluoroacetate dehalogenase from Moraxella sp. B (FAc-DEX) catalyzes cleavage of the carbon–fluorine bond of fluoroacetate, whose dissociation energy is among the highest found in natural products. Asp105 functions as the catalytic nucleophile that attacks the α-carbon atom of the substrate to displace the fluorine atom. In spite of the essential role of Asp105, we found that site-directed mutagenesis to replace Asp105 by Asn does not result in total inactivation of the enzyme. The activity of the mutant enzyme increased in a time- and temperature-dependent manner. We analyzed the enzyme by ion-spray mass spectrometry and found that the reactivation was caused by the hydrolytic deamidation of Asn105 to generate the wild-type enzyme. Unlike Asn10 of the l-2-haloacid dehalogenase (L-DEX YL) D10N mutant, Asn105 of the fluoroacetate dehalogenase D105N mutant did not function as a nucleophile to catalyze the dehalogenation.
Keywords:Fluoroacetate dehalogenase  Asparagine residue  Deamidation  Site-directed mutagenesis  Mass spectrometry  FAc-DEX  L-DEX YL  MS  mass spectrometry
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