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dnaJ and gyrB gene sequence relationship among species and strains of genus Streptococcus
Authors:Itoh Yoko  Kawamura Yoshiaki  Kasai Hiroaki  Shah Mohammad Monir  Nhung Pham Hong  Yamada Makiko  Sun Xiaosong  Koyana Takashi  Hayashi Masahiro  Ohkusu Kiyofumi  Ezaki Takayuki
Affiliation:Department of Microbiology, Regeneration and Advanced Medical Science, Gifu University Graduate School of Medicine, 1-1 Yanagido, Gifu 501-1194, Japan.
Abstract:The dnaJ and gyrB nucleotide sequences were determined for members of the genus Streptococcus. The average similarity between the species tested was 76.4% (69.7-100%) for dnaJ and 75.9 (70.1-98.7%) for gyrB. These data indicated that the dnaJ and gyrB genes are more divergent and more discriminatory than the 16S rDNA gene. Furthermore, the variation in the dnaJ nucleotide sequences among the mitis group was greater than that of the gyrB nucleotide sequences, especially between Streptococcus pneumoniae and Streptococcus mitis. Subsequently, the high discrimination power of dnaJ within the mitis group was confirmed. Thus, we conclude that the dnaJ and gyrB genes are efficient alternative targets for the classification of the genus Streptococcus, and that dnaJ is suitable for phylogenetic analysis of closely related Streptococcus strains.
Keywords:Streptococcus   dnaJ   gyrB   Taxonomic study   Mitis group
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