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Novel Proteome Extraction Method Illustrates a Conserved Immunological Signature of MSI-H Colorectal Tumors
Authors:Elez D. Vainer  Juliane Kania-Almog  Ghadeer Zatara  Yishai Levin  Gilad W. Vainer
Affiliation:1. Department of Gastroenterology, Hadassah—Hebrew University Medical Center, Jerusalem, Israel;2. Tel Aviv Sourasky Medical Center, Sackler School of Medicine, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel;3. Department of Pathology, Hadassah—Hebrew University Medical Center, Jerusalem, Israel;4. De Botton Institute for Protein Profiling, The Nancy and Stephen Grand Israel National Center for Personalized Medicine, Weizmann Institute of Science, Rehovot, Israel
Abstract:
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  • Highlights
    • •TOP: robust, bio-friendly FFPE proteome extraction method with less fixation bias.
    • •Proteome of MSI-H colorectal cancer identifies immunobiology key elements.
    • •MSI-H tumor displays an “INFg-STAT1 centric signature”.
    • •Long-term IFNg induction In-vitro mimicks MSI-H signature.
    Keywords:Clinical proteomics  colorectal cancer  immunohistochemistry  immunology  molecular biology  label-free quantification  inflammatory response
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