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Codon swapping as a possible evolutionary mechanism
Authors:Eörs Szathmáry
Affiliation:1. Ecological Research Group, Department of Plant Taxonomy and Ecology, E?tv?s University, Kun Béla tér 2, H-1083, Budapest, Hungary
Abstract:Summary It is apparent in the genetic code that amino acids of similar chemical nature have similar codons. I show how through successive codon captures (multiple rounds of Osawa-Jukes type reassignments), complete codon swappings in an unfavorable genetic code are evolutionarily feasible. This mechanisms could have complemented the ambiguity reduction and the vocabulary extension processes of codon-amino acid assignments. Evolution of wobble rules is implied. Transfer RNA molecules and synthetases may still carry memories of it.
Keywords:Genetic code  Codon capture  Codon swapping  Codon shuffling  Ambiguity reduction  Molecular evolution  Origin of life
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