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Active-Site Structure of the Thermophilic Foc-Subunit Ring in Membranes Elucidated by Solid-State NMR
Authors:Su-Jin Kang  Yasuto Todokoro  Ikuko Yumen  Bo Shen  Iku Iwasaki  Toshiharu Suzuki  Atsushi Miyagi  Masasuke Yoshida  Toshimichi Fujiwara  Hideo Akutsu
Institution: Institute for Protein Research, Osaka University, Suita, Japan; Department of Biophysics and Chemical Biology, Seoul National University, Seoul, Republic of Korea;§ Chemical Resources Laboratory, Tokyo Institute of Technology, Yokohama, Japan; Department of Molecular Biosciences, Kyoto Sangyo University, Kyoto, Japan
Abstract:FoF1-ATP synthase uses the electrochemical potential across membranes or ATP hydrolysis to rotate the Foc-subunit ring. To elucidate the underlying mechanism, we carried out a structural analysis focused on the active site of the thermophilic c-subunit (TFoc) ring in membranes with a solid-state NMR method developed for this purpose. We used stereo-array isotope labeling (SAIL) with a cell-free system to highlight the target. TFoc oligomers were purified using a virtual ring His tag. The membrane-reconstituted TFoc oligomer was confirmed to be a ring indistinguishable from that expressed in E. coli on the basis of the H+-translocation activity and high-speed atomic force microscopic images. For the analysis of the active site, 2D 13C-13C correlation spectra of TFoc rings labeled with SAIL-Glu and -Asn were recorded. Complete signal assignment could be performed with the aid of the Cαi+1-Cαi correlation spectrum of specifically 13C,15N-labeled TFoc rings. The Cδ chemical shift of Glu-56, which is essential for H+ translocation, and related crosspeaks revealed that its carboxyl group is protonated in the membrane, forming the H+-locked conformation with Asn-23. The chemical shift of Asp-61 Cγ of the E. coli c ring indicated an involvement of a water molecule in the H+ locking, in contrast to the involvement of Asn-23 in the TFoc ring, suggesting two different means of proton storage in the c rings.
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