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Complete genome sequence of the Medicago microsymbiont Ensifer (Sinorhizobium) medicae strain WSM419
Authors:Reeve Wayne  Chain Patrick  O'Hara Graham  Ardley Julie  Nandesena Kemanthi  Bräu Lambert  Tiwari Ravi  Malfatti Stephanie  Kiss Hajnalka  Lapidus Alla  Copeland Alex  Nolan Matt  Land Miriam  Hauser Loren  Chang Yun-Juan  Ivanova Natalia  Mavromatis Konstantinos  Markowitz Victor  Kyrpides Nikos  Gollagher Margaret  Yates Ron  Dilworth Michael  Howieson John
Abstract:Ensifer (Sinorhizobium) medicae is an effective nitrogen fixing microsymbiont of a diverse range of annual Medicago (medic) species. Strain WSM419 is an aerobic, motile, non-spore forming, Gram-negative rod isolated from a M. murex root nodule collected in Sardinia, Italy in 1981. WSM419 was manufactured commercially in Australia as an inoculant for annual medics during 1985 to 1993 due to its nitrogen fixation, saprophytic competence and acid tolerance properties. Here we describe the basic features of this organism, together with the complete genome sequence, and annotation. This is the first report of a complete genome sequence for a microsymbiont of the group of annual medic species adapted to acid soils. We reveal that its genome size is 6,817,576 bp encoding 6,518 protein-coding genes and 81 RNA only encoding genes. The genome contains a chromosome of size 3,781,904 bp and 3 plasmids of size 1,570,951 bp, 1,245,408 bp and 219,313 bp. The smallest plasmid is a feature unique to this medic microsymbiont.
Keywords:microsymbiont  non-pathogenic  aerobic  Gram-negative rod  root-nodule bacteria  nitrogen fixation  Alphaproteobacteria
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