Computer programs for single channel kinetic analysis |
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Authors: | E É Saftenku |
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Institution: | (1) Bogomolets Institute of Physiology, National Academy of Sciences of Ukraine, Kyiv, Ukraine |
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Abstract: | Programs are represented that permit us to solve the following three problems of single channel kinetic activity: 1) to fulfill
a preliminary analysis of single channel activity, i.e., to estimate the minimum number of agonist molecules that bind with
a channel structure, the minimum number of open and closed kinetic states of the channel, and possible connections between
these states, to check the condition of thermodynamic equilibrium and adequacy of a Markovian assumption for modeling of the
channel kinetics; 2) to select the model of channel gating: for a given number of kinetic states, the potential models that
permit us to fit a list of dwell-times observed in an experiment are examined; the model is selected by a criterium of the
maximum likelihood; 3) to simulate the response to a rapid change of the agonist concentration of single channels that demonstrate
processes of adaptation or inactivation. |
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Keywords: | |
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