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Frequently asked questions about chlorophyll fluorescence,the sequel
Authors:Hazem M Kalaji  Gert Schansker  Marian Brestic  Filippo Bussotti  Angeles Calatayud  Lorenzo Ferroni  Vasilij Goltsev  Lucia Guidi  Anjana Jajoo  Pengmin Li  Pasquale Losciale  Vinod K Mishra  Amarendra N Misra  Sergio G Nebauer  Simonetta Pancaldi  Consuelo Penella  Martina Pollastrini  Kancherla Suresh  Eduardo Tambussi  Marcos Yanniccari  Marek Zivcak  Magdalena D Cetner  Izabela A Samborska  Alexandrina Stirbet  Katarina Olsovska  Kristyna Kunderlikova  Henry Shelonzek  Szymon Rusinowski  Wojciech B?ba
Institution:1.Department of Plant Physiology, Faculty of Agriculture and Biology,Warsaw University of Life Sciences – SGGW,Warsaw,Poland;2.Lucerne,Switzerland;3.Department of Plant Physiology,Slovak Agricultural University,Nitra,Slovak Republic;4.Department of Agricultural, Food and Environmental Sciences,University of Florence,Florence,Italy;5.Departamento de Horticultura,Instituto Valenciano de Investigaciones Agrarias,Moncada,Spain;6.Department of Life Sciences and Biotechnology,University of Ferrara,Ferrara,Italy;7.Department of Biophysics and Radiobiology, Faculty of Biology,St. Kliment Ohridski University of Sofia,Sofia,Bulgaria;8.Department of Agriculture,Food and Environment,Pisa,Italy;9.School of Life Sciences,Devi Ahilya University,Indore,India;10.State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture,Northwest A&F University,Yangling,China;11.Consiglio per la ricerca in agricoltura e l’analisi dell’economia agraria [Research Unit for Agriculture in Dry Environments],Bari,Italy;12.Department of Biotechnology,Doon (P.G.) College of Agriculture Science,Dehradun,India;13.Centre for Life Sciences,Central University of Jharkhand,Ranchi,India;14.Departamento de Producción vegetal,Universitat Politècnica de València,Valencia,Spain;15.ICAR – Indian Institute of Oil Palm Research,West Godavari Dt.,India;16.Institute of Plant Physiology,INFIVE (Universidad Nacional de La Plata — Consejo Nacional de Investigaciones Científicas y Técnicas),La Plata,Argentina;17.Newport News,USA;18.Department of Plant Physiology,Slovak University of Agriculture,Nitra,Slovak Republic;19.Department of Plant Anatomy and Cytology, Faculty of Biology and Environmental Protection,University of Silesia,Katowice,Poland;20.Institute for Ecology of Industrial Areas,Katowice,Poland;21.Department of Plant Ecology, Institute of Botany,Jagiellonian University,Kraków,Poland
Abstract:Using chlorophyll (Chl) a fluorescence many aspects of the photosynthetic apparatus can be studied, both in vitro and, noninvasively, in vivo. Complementary techniques can help to interpret changes in the Chl a fluorescence kinetics. Kalaji et al. (Photosynth Res 122:121–158, 2014a) addressed several questions about instruments, methods and applications based on Chl a fluorescence. Here, additional Chl a fluorescence-related topics are discussed again in a question and answer format. Examples are the effect of connectivity on photochemical quenching, the correction of F V /F M values for PSI fluorescence, the energy partitioning concept, the interpretation of the complementary area, probing the donor side of PSII, the assignment of bands of 77 K fluorescence emission spectra to fluorescence emitters, the relationship between prompt and delayed fluorescence, potential problems when sampling tree canopies, the use of fluorescence parameters in QTL studies, the use of Chl a fluorescence in biosensor applications and the application of neural network approaches for the analysis of fluorescence measurements. The answers draw on knowledge from different Chl a fluorescence analysis domains, yielding in several cases new insights.
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