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Identification and cloning of TWIK-originated similarity sequence (TOSS): a novel human 2-pore K channel principal subunit
Authors:David J Pountney  Iosif Gulkarov  Eleazar Vega-Saenz de Miera  Douglas Holmes  Michael Saganich  Bernardo Rudy  Michael Artman  William A Coetzee
Institution:Department of Pediatric Cardiology, New York University School of Medicine, NY 10016, USA. david.pountney@med.nyu.edu
Abstract:We have identified and cloned a new member of the mammalian tandem pore domain K+ channel subunit family, TWIK-originated similarity sequence, from a human testis cDNA library. The 939 bp open reading frame encodes a 313 amino acid polypeptide with a calculated Mr of 33.7 kDa. Despite the same predicted topology, there is a relatively low sequence homology between TWIK-originated similarity sequence and other members of the mammalian tandem pore domain K+ channel subunit family group. TWIK-originated similarity sequence shares a low (< 30%) identity with the other mammalian tandem pore domain K+ channel subunit family group members and the highest identity (34%) with TWIK-1 at the amino acid level. Similar low levels of sequence homology exist between all members of the mammalian tandem pore domain K+ channel subunit family. Potential glycosylation and consensus PKC sites are present. Northern analysis revealed species and tissue-specific expression patterns. Expression of TWIK-originated similarity sequence is restricted to human pancreas, placenta and heart, while in the mouse, TWIK-originated similarity sequence is expressed in the liver. No functional currents were observed in Xenopus laevis oocytes or HEK293T cells, suggesting that TWIK-originated similarity sequence may be targeted to locations other than the plasma membrane or that TWIK-originated similarity sequence may represent a novel regulatory mammalian tandem pore domain K+ channel subunit family subunit.
Keywords:potassium channel  cloning  sequence analysis  nucleotide sequence  complementary DNA
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