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Amplification of DNA bound on clay minerals
Authors:A J ALVAREZ  M KHANNA  G A TORANZOS  & G STOTZKY
Institution:Department of Biology, University of Puerto Rico, Rio Piedras, PR 00931, USA, ,;Laboratory of Microbial Ecology, Department of Biology, New York University, New York, NY 10003, USA
Abstract:DNA adsorbs and binds on clay minerals, which provides protection to the DNA against degradation by nucleases but does not eliminate the ability of bound DNA to transform cells. These observations support the concept that 'cryptic genes' can persist in the environment when bound on particles and that the genes could subsequently be expressed if an appropriate host was transformed. The polymerase chain reaction (PCR) was used to amplify free and bound DNA from Bacillus subtilis and calf thymus. DNA bound on montmorillonite, but not on kaolinite, was amplified. However, amplification occurred when kaolinite was pretreated with sodium metaphosphate. DNA was not released from the clays during the amplification procedure. The type of clay (e.g. its structure and charges) affected amplification. Because DNA bound on clay is protected against biodegradation, the ability to amplify DNA bound on clay by the PCR has palaeontological, archaeological, and anthropological implications for the detection of 'ancient' DNA, as well as for monitoring the persistence of recombinant DNA introduced to the environment in genetically modified organisms.
Keywords:amplification of clay-bound DNA  clay minerals  DNA adsorption and binding  polymerase chain reaction
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