The structure of active opsin as a basis for identification of GPCR agonists by dynamic homology modelling and virtual screening assays |
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Authors: | Schneider Michael Wolf Steffen Schlitter Jürgen Gerwert Klaus |
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Affiliation: | Department of Biophysics, University of Bochum, Bochum, Germany. |
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Abstract: | Most of the currently available G protein-coupled receptor (GPCR) crystal structures represent an inactive receptor state, which has been considered to be suitable only for the discovery of antagonists and inverse agonists in structure-based computational ligand screening. Using the β(2)-adrenergic receptor (B2AR) as a model system, we show that a dynamic homology model based on an "active" opsin structure without further incorporation of experimental data performs better than the crystal structure of the inactive B2AR in finding agonists over antagonists/inverse agonists. Such "active-like state" dynamic homology models can therefore be used to selectively identify GPCR agonists in in silico ligand libraries. |
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