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The Naphthoquinone Diospyrin Is an Inhibitor of DNA Gyrase with a Novel Mechanism of Action
Authors:Shantanu Karkare  Terence T H Chung  Frederic Collin  Lesley A Mitchenall  Adam R McKay  Sandra J Greive  Jacobus J M Meyer  Namrita Lall  Anthony Maxwell
Institution:From the Department of Biological Chemistry, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, United Kingdom, ;the §Department of Chemistry, University College London, London WC1H 0AJ, United Kingdom, and ;the Department of Plant Science, University of Pretoria, Pretoria 0002, South Africa
Abstract:Tuberculosis and other bacterial diseases represent a significant threat to human health. The DNA topoisomerases are excellent targets for chemotherapy, and DNA gyrase in particular is a well-validated target for antibacterial agents. Naphthoquinones (e.g. diospyrin and 7-methyljuglone) have been shown to have therapeutic potential, particularly against Mycobacterium tuberculosis. We have found that these compounds are inhibitors of the supercoiling reaction catalyzed by M. tuberculosis gyrase and other gyrases. Our evidence strongly suggests that the compounds bind to the N-terminal domain of GyrB, which contains the ATPase active site, but are not competitive inhibitors of the ATPase reaction. We propose that naphthoquinones bind to GyrB at a novel site close to the ATPase site. This novel mode of action could be exploited to develop new antibacterial agents.
Keywords:Antibiotics  Antibiotic Action  DNA Gyrase  DNA Topoisomerase  Mycobacterium tuberculosis  Tuberculosis  Diospyrin  Naphthoquinones
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