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Comparison of codon usage measures and their applicability in prediction of microbial gene expressivity
Authors:Fran?Supek,Kristian?Vlahovi?ek  author-information"  >  author-information__contact u-icon-before"  >  mailto:kristian@icgeb.org"   title="  kristian@icgeb.org"   itemprop="  email"   data-track="  click"   data-track-action="  Email author"   data-track-label="  "  >Email author
Affiliation:(1) Department of Molecular Biology, Division of Biology, Faculty of Science, Zagreb University, Rooseveltov trg 6, 10000 Zagreb, Croatia;(2) Protein Structure and Bioinformatics, International Centre for Genetic Engineering and Biotechnology, Padriciano 99, 34012 Trieste, Italy
Abstract:

Background  

There are a number of methods (also called: measures) currently in use that quantify codon usage in genes. These measures are often influenced by other sequence properties, such as length. This can introduce strong methodological bias into measurements; therefore we attempted to develop a method free from such dependencies. One of the common applications of codon usage analyses is to quantitatively predict gene expressivity.
Keywords:
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