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Genome-wide association study of aspirin-exacerbated respiratory disease in a Korean population
Authors:Byung Lae Park  Tae-Hoon Kim  Jeong-Hyun Kim  Joon Seol Bae  Charisse Flerida A. Pasaje  Hyun Sub Cheong  Lyoung Hyo Kim  Jong-Sook Park  Ho Sung Lee  Myung-Sin Kim  Inseon S. Choi  Byoung Whui Choi  Mi-Kyeong Kim  SeungWoo Shin  Hyoung Doo Shin  Choon Sik Park
Affiliation:1. Department of Genetic Epidemiology, SNP Genetics, Inc, Seoul, Republic of Korea
3. Division of Allergy and Respiratory Medicine, Genome Research Center for Allergy and Respiratory Diseases, Soonchunhyang University Bucheon Hospital, 1174, Jung-dong, Wonmi-gu, Bucheon, Gyeonggi-do, 420-020, Republic of Korea
2. Department of Life Science, Sogang University, 1 Shinsu-dong, Mapo-gu, Seoul, 121-742, Republic of Korea
4. Division of Allergy and Respiratory Medicine, Soonchunhyang University Cheonan Hospital, Cheonan, Chungcheongnam-do, Republic of Korea
5. Division of Allergy and Respiratory Medicine, Soonchunhyang University Gumi Hospital, Gumi, Kyungsangbook-do, Republic of Korea
6. Department of Allergy, Chonnam National University, Gwangju, Republic of Korea
7. Department of Internal Medicine, Chung-Ang University Yongsan Hospital, Seoul, Republic of Korea
8. Division of Internal Medicine, College of Medicine, Chungbuk National University, 62 Gaesin-dong, Heungduk-gu, Cheongju, Chungcheongbuk-do, 361-711, Republic of Korea
Abstract:Aspirin-exacerbated respiratory disease (AERD) is a nonallergic clinical syndrome characterized by a severe decline in forced expiratory volume in one second (FEV1) following the ingestion of non-steroidal anti-inflammatory drugs (NSAIDs) such as aspirin. The effects of genetic variants have not fully explained all of the observed individual differences to an aspirin challenge despite previous attempts to identify AERD-related genes. In the present study, we performed genome-wide association study (GWAS) and targeted association study in Korean asthmatics to identify new genetic factors associated with AERD. A total of 685 asthmatic patients without AERD and 117 subjects with AERD were used for the GWAS of the first stage, and 996 asthmatics without AERD and 142 subjects with AERD were used for a follow-up study. A total of 702 SNPs were genotyped using the GoldenGate assay with the VeraCode microbead. GWAS revealed the top-ranked variants in 3′ regions of the HLA-DPB1 gene. To investigate the detailed genetic effects of an associated region with the risk of AERD, a follow-up targeted association study with the 702 single nucleotide polymorphisms (SNPs) of 14 genes was performed on 802 Korean subjects. In a case–control analysis, HLA-DPB1 rs1042151 (Met105Val) shows the most significant association with the susceptibility of AERD (p = 5.11 × 10?7; OR = 2.40). Moreover, rs1042151 also shows a gene dose for the percent decline of FEV1 after an aspirin challenge (p = 2.82 × 10?7). Our findings show that the HLA-DPB1 gene polymorphism may be the most susceptible genetic factor for the risk of AERD in Korean asthmatics and confirm the importance of HLA-DPB1 in the genetic etiology of AERD.
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