A search tool for identification and analysis of conserved sequence patterns in Saccharomyces spp. orthologous promoter |
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Authors: | Kohli Davinder K Srikanth Chittur V Bachhawat Anand K |
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Affiliation: | Institute of Microbial Technology, Sector 39-A, Chandigarh-160 036, India. |
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Abstract: | We describe a web-based resource to identify, search and analyze sequence patterns conserved in the multiple sequence alignments of orthologous promoters from closely related / distant Saccharomyces spp. The webtool interfaces with a database where conserved sequence patterns (greater than 4 bp) have been previously extracted from genome-wide promoter alignments, allowing one to carry out user-defined genome-wide searches for conserved sequences to assist in the discovery of novel promoter elements based on comparative genomics. The web-based server can be accessed at http://www2.imtech.res.in/ anand/sacch_prom_pat.html. |
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