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Genome size, base composition and karyotype of Jatropha curcas L., an important biofuel plant
Authors:Carlos Roberto Carvalho  Wellington Ronildo Clarindo  Milene Miranda Praa  Fernanda Santos Araújo  Nicolas Carels
Institution:

aUniversidade Federal de Viçosa (UFV), Laboratório de Citogenética e Citometria, Viçosa, MG, Brazil

bUniversidade Estadual de Santa Cruz (UESC), Núcleo de Biologia Computacional e Gestão de Informações Biotecnológicas, Ilhéus, BA, Brazil

cFundação Oswaldo Cruz (FIOCRUZ), Instituto Oswaldo Cruz (IOC), Laboratório de Genômica Funcional e Bioinformática, Rio de Janeiro, RJ, Brazil

Abstract:In this report, we present the genome size, the base composition and the karyotype of Jatropha curcas L., which is becoming an important oleaginous crop in tropical areas for biofuel production. The genome size and the base composition were obtained by flow cytometry of G0/G1 nuclei stained with propidium iodide (for genome size), DAPI (for AT) and chromomycin A3 (for GC), respectively. The karyotype was obtained by root-tip (i) incubation with amiprophos-methyl (microtubule inhibitor), (ii) digestion in enzymatic solution, (iii) squashing on glass slides, (iv) fixation and (v) coloration in Giemsa solution. We found that the genome of J. curcas is relatively small and in the same size range as that of rice. The flow cytometry indicates an average 2C value of 0.85 pg and an average base composition of 38.7% GC. The karyotype of J. curcas is made up of 22 relatively small metacentric and submetacentric chromosomes whose size range from 1.71 to 1.24 μm. The possibility of a polyploidization event in the evolutionary history of J. curcas is discussed.
Keywords:2C DNA content  Base composition  Biofuel plant  Flow cytometry  Karyotype  Jatropha curcas
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