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Formation of type II F-primes from unstable Hfrs and their recA-independent conversion to other F-prime types
Authors:Jerry M Buysse and Sunil Palchaudhuri
Institution:(1) Department of Immunology and Microbiology, Wayne State University School of Medicine, 48201 Detroit, MI, USA
Abstract:Summary Four E. coli Hfr strains, representing stable (Hfr Cavalli), moderately stable (AB312) and unstable (Ra-1, Ra-2) Hfr states, were used in the isolation of a series of Fprime plasmids. Type II Fprimes were found to be the most prevalent Fprime plasmid formed from all of the Hfrs, while the percentages of Deltatra Fprimes increased as the stability of the Hfr increased. Two observations suggested that Fprime formation in unstable Hfrs like Ra-2 may proceed through a type II Fprime precursor. First, the major Fprime products of Ra-2 are tra + type II Fprimes and, second, other Fprime types (I, II) and classes (tra +, Deltatra) from Ra-2 appeared to be deletion derivatives of a larger Fprime progenitor. By monitoring the molecular changes that occur when the Ra-2 derived type II Fprime pWS200 is transferred from one recA host to another, we have found that all Fprime types and classes can be generated from pWS200 in a recA-independent manner. F sequences involved in the genetic conversions of pWS200 include the oriT locus and the directly repeated gammadelta junctions of F and chromosomal DNA. A model for the formation of Fprimes in unstable Hfrs is postulated in which a tra + type II Fprime primary excision product is seen to be modified, through recA-independent processes, to other Fprime types and classes. This model differs from the current model of Fprime formation in that independent excision events from the Hfr chromosome are not seen as the source of type I and type II Fprimes.These studies have also shown that the formation of deltatra Fprimes is a recA-independent process that can occur from the Fprime and Hfr states, that gammadelta-mediated deletions in pWS200 often demonstrate regional specificity in having endpoints near the ilv operon and that genetic alterations in either replication origin of pWS200 (F oriV, chromosomal oriC) stabilize the replication of this ldquomini-Hfrrdquo cointegrate.
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