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The crystal structure of Echinococcus granulosus fatty-acid-binding protein 1
Authors:Emma Jakobsson  Gabriela Alvite  Terese Bergfors  Adriana Esteves  Gerard J. Kleywegt
Affiliation:1. Department of Cell and Molecular Biology, Uppsala University, Biomedical Centre, Box 596, SE-751 24 Uppsala, Sweden;2. Biochemistry Section, Department of Cell and Molecular Biology, Faculty of Sciences, Universidad de la República, Iguá 4225, 11400 Montevideo, Uruguay
Abstract:We describe the 1.6 Å crystal structure of the fatty-acid-binding protein EgFABP1 from the parasitic platyhelminth Echinococcus granulosus. E. granulosus causes hydatid disease, which is a major zoonosis. EgFABP1 has been implicated in the acquisition, storage, and transport of lipids, and may be important to the organism since it is incapable of synthesising most of its lipids de novo. Moreover, EgFABP1 is a promising candidate for a vaccine against hydatid disease.The crystal structure reveals that EgFABP1 has the expected 10-stranded β-barrel fold typical of the family of intracellular lipid-binding proteins, and that it is structurally most similar to P2 myelin protein. We describe the comparison of the crystal structure of EgFABP1 with these proteins and with an older homology model for EgFABP1.The electron density reveals the presence of a bound ligand inside the cavity, which we have interpreted as palmitic acid. The carboxylate group of the fatty acid interacts with the protein's P2 motif, consisting of a conserved triad R…R-x-Y. The hydrophobic tail of the ligand assumes a fairly flat, U-shaped conformation and has relatively few interactions with the protein.We discuss some of the structural implications of the crystal structure of EgFABP1 for related platyhelminthic FABPs.
Keywords:Crystal structure  Fatty-acid-binding protein  Hydatid disease  ALBP  adipocyte lipid-binding protein  BFABP  brain fatty-acid-binding protein  cRABP  cellular retinoic-acid-binding protein  cRBP  cellular retinol-binding protein  EFABP  epidermal fatty-acid-binding protein  FABP  fatty-acid-binding protein  IFABP  intestinal fatty-acid-binding protein  iLBP  intracellular lipid-binding protein  ILBP  ileal lipid-binding protein  LFABP  liver fatty-acid-binding protein  MFABP  muscle fatty-acid-binding protein  normalised RMSD for 100 aligned residues  PDB  Protein Data Bank  RMSD  root-mean-square distance or deviation
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