FASIMU: flexible software for flux-balance computation series in large metabolic networks |
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| Authors: | Andreas Hoppe Sabrina Hoffmann Andreas Gerasch Christoph Gille Hermann-Georg Holzhütter |
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| Institution: | 1.Institute of Biochemistry,University Medicine Charité Berlin,Berlin,Germany;2.Department of Parallel Computing,Wilhelm-Schickard Institute of Computer Science,Tübingen,Germany |
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| Abstract: | Background Flux-balance analysis based on linear optimization is widely used to compute metabolic fluxes in large metabolic networks
and gains increasingly importance in network curation and structural analysis. Thus, a computational tool flexible enough
to realize a wide variety of FBA algorithms and able to handle batch series of flux-balance optimizations is of great benefit. |
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