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广西壮族自治区HIV-1流行毒株的基因序列测定和亚型分析
引用本文:陈杰,苏玲,梁绍伶,刘伟,刘小良,梁富雄,邢辉,李荣建,邵一鸣. 广西壮族自治区HIV-1流行毒株的基因序列测定和亚型分析[J]. 病毒学报, 1998, 14(3): 240-245
作者姓名:陈杰  苏玲  梁绍伶  刘伟  刘小良  梁富雄  邢辉  李荣建  邵一鸣
作者单位:广西壮族自治区卫生防疫站,中国预防医学科学院艾滋病参比实验室
摘    要:使用PCR技术对14份广西HIV-1阳性感染者外周血单核细胞(PBMCs)样品进行扩增,获得HIV-1膜蛋白(env)基因的核酸片段,并对其C2-V3及邻区350-450个核苷酸序列进行了测定和分析。结果表明,14份样品中9份为泰国B(B′)亚型,5份为E亚型毒株。其中B′亚型毒株的基因离散率为4.2%,与A-E参考亚型及部分B亚型代表株序列相比较,与包括泰国、缅甸及云南德宏在内的B亚型毒株序列十分接近,相互之间基因离散率在3.0%-4.4%的范围内;而E亚型毒株的基因离散率为2.1%,与国际E亚型毒株的基因离散率最近,为5.6%,与其它国际参考亚型基因离散率很远,在21.1%-27.3%。根据以上数据及其它资料提示,广西存在B′和E两种亚型的HIV-1的流行,且其B′亚型毒株的传入,与流行在云南德宏州的相同亚型HIV-1毒株密切相关,而E亚型毒株则可能是由泰国经越南传入广西的

关 键 词:HIV-1,亚型,基因变异,序列测定

REGION OF GP120 GENES AMONG HIV-1 STRAINS IN GUANGXI AUTONOMOUS REGION OF THE ZHUANGS
Chen Jie Su Ling Liang Shaoling Liu Wei Liu Xiaoliang Liang Fuxiong Xing Hui Li Rongjian Shao Yiming. REGION OF GP120 GENES AMONG HIV-1 STRAINS IN GUANGXI AUTONOMOUS REGION OF THE ZHUANGS[J]. Chinese journal of virology, 1998, 14(3): 240-245
Authors:Chen Jie Su Ling Liang Shaoling Liu Wei Liu Xiaoliang Liang Fuxiong Xing Hui Li Rongjian Shao Yiming
Affiliation:Chen Jie 1 Su Ling 2 Liang Shaoling 1 Liu Wei 1 Liu Xiaoliang 2 Liang Fuxiong 1 Xing Hui 2 Li Rongjian 1 Shao Yiming 2
Abstract:HIV-1 env gene were amplified by PCR from uncultured peripheral blood mononuclear cells (PBMCs) from 14 HIV-1 seropositive patients in Guangxi in the mid of 1996.The C2-V3 region(about 450bp) of the amplified DNA fragments were sequenced.Sequence analysis shows that there are two HIV-1 subtypes,B and E with 4.2% and 2.1% gene divergence inside each subtype.The 9 subtype B strains,after compared with sequences of several reference HIV-1 strains,were closely related to those found in Thailand,Myanmar,Yunnan and other provinces in China,and the nucleotide sequence divergence between them ranged from 3.0% to 4.4%;meanwhile,the 5 subtype E strains were most close to the international subtype E,and they are all drug users.The results above suggest that there is a recent epidemic of both B and E subtype HIV-1 strains in Guangxi.
Keywords:HIV-1  Subtype  Gene variation  Sequencing 1.Guangxi Health and Anti-epidemic Center  Nanning 530021. 2.National AIDS Reference Laboratory  CAPM  Beijing 100052.
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