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Measurement of small scalar and dipolar couplings in purine and pyrimidine bases*
Authors:Luká   í   dek, Haihong Wu, Juli Feigon  Vladimí   r Sklená  
Affiliation:(1) Faculty of Science, National Centre for Biomolecular Research, Masaryk University, Kotlá"rcaron"ská 2, 61137 Brno, Czech Republic;(2) Department of Chemistry and Biochemistry and Molecular Biology Institute, University of California, Los Angeles, Los Angeles, California, 90024, U.S.A
Abstract:A suite of spin-state-selective excitation (S3E) NMR experiments for the measurements of small one-bond (13C-13C, 15N-13C) and two-bond (1H-13C, 1H-15N) coupling constants in 13C,15N labeled purine and pyrimidine bases is presented. The incorporation of band-selective shaped pulses, elimination of the cross talk between agr and beta sub-spectra, and accuracy and precision of the proposed approach are discussed. Merits of using S3E rather than agr/beta-half-filter are demonstrated using results obtained on isotopically labeled DNA oligonucleotides.
Keywords:NMR methods  nucleic acid bases  residual dipolar couplings  spin-state-selective filters
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