GeneOrder3.0: Software for comparing the order of genes in pairs of small bacterial genomes期刊界 All Journals 搜尽天下杂志传播学术成果专业期刊搜索期刊信息化学术搜索

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GeneOrder3.0: Software for comparing the order of genes in pairs of small bacterial genomes

Authors:	Srikanth?Celamkoti Sashidhara?Kundeti Anjan?Purkayastha Raja?Mazumder Charles?Buck Email author" target="_blank">Donald?Seto Email author

Institution:	(1) Bioinformatics and Computational Biology, School of Computational Sciences, George Mason University, 10900 University Boulevard, MSN 5B3, Manassas, VA 20110, USA;(2) Biochemistry and Molecular Biology Department, Georgetown University School of Medicine, 4000 Reservoir Road, Washington, D.C. 20057, USA;(3) Virology Program, American Type Culture Collection (ATCC)., 10801 University Boulevard, Manassas, VA 20110, USA

Abstract:	Background An increasing number of whole viral and bacterial genomes are being sequenced and deposited in public databases. In parallel to the mounting interest in whole genomes, the number of whole genome analyses software tools is also increasing. GeneOrder was originally developed to provide an analysis of genes between two genomes, allowing visualization of gene order and synteny comparisons of any small genomes. It was originally developed for comparing virus, mitochondrion and chloroplast genomes. This is now extended to small bacterial genomes of sizes less than 2 Mb.

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