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Correlation between 15N NMR chemical shifts in proteins and secondary structure
Authors:Hongbiao Le  Eric Oldfield
Institution:(1) Department of Chemistry, University of Illinois at Urbana-Champaign, 505 South Mathews Avenue, 61801 Urbana, IL, USA
Abstract:Summary An empirical correlation between the peptide 15N chemical shift, delta15Ni, and the backbone torsion angles phgri, psgri–1 is reported. By using two-dimensional shielding surfaces Delta(phgripsgr1–1), it is possible in many cases to make reasonably accurate predictions of 15N chemical shifts for a given structure. On average, the rms error between experiment and prediction is about 3.5 ppm. Results for threonine, valine and isoleucine are worse (sim4.8 ppm), due presumably to chi1-distribution/gamma-gauche effects. The rms errors for the other amino acids are sim3 ppm, for a typical maximal chemical shift range of sim15–20 ppm. Thus, there is a significant correlation between 15N chemical shift and secondary structure.
Keywords:Secondary structure  Shielding surface  15N shielding  Torsion angle
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