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BicOverlapper: a tool for bicluster visualization
Authors:Santamaría Rodrigo  Therón Roberto  Quintales Luis
Institution:Departamento de Informática y Automática, Pz. de Los Caídos S/N, 37008 Salamanca, Spain
Abstract:Summary: BicOverlapper is a tool to visualize biclusters fromgene-expression matrices in a way that helps to compare biclusteringmethods, to unravel trends and to highlight relevant genes andconditions. A visual approach can complement biological andstatistical analysis and reduce the time spent by specialistsinterpreting the results of biclustering algorithms. The techniqueis based on a force-directed graph where biclusters are representedas flexible overlapped groups of genes and conditions. Availability: The BicOverlapper software and supplementary materialare available at http://vis.usal.es/bicoverlapper Contact: rodri{at}usal.es Associate Editor: John Quackenbush {dagger}The first two authors should be reported as joint first authors.
Keywords:
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