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Crystal structure of malonyl CoA-Acyl carrier protein transacylase from Xanthomanous oryzae pv. oryzae and its proposed binding with ACP
Authors:Sampath Natarajan  Jin-Kwang Kim  Tae-Kyun Jung  Thanh Thi Ngoc Doan  Ho-Phuong-Thuy Ngo  Myoung-Ki Hong  Seunghwan Kim  Viet Pham Tan  Seok Joon Ahn  Sang Hee Lee  Yesun Han  Yeh-Jin Ahn  Lin-Woo Kang
Institution:Department of Advanced Technology Fusion, Konkuk University, Seoul 143-701, Korea.
Abstract:Xanthomonas oryzae pv. oryzae (Xoo) is a plant bacterial pathogen that causes bacterial blight (BB) disease, resulting in serious production losses of rice. The crystal structure of malonyl CoA-acyl carrier protein transacylase (XoMCAT), encoded by the gene fabD (Xoo0880) from Xoo, was determined at 2.3 Å resolution in complex with N-cyclohexyl-2-aminoethansulfonic acid. Malonyl CoA-acyl carrier protein transacylase transfers malonyl group from malonyl CoA to acyl carrier protein (ACP). The transacylation step is essential in fatty acid synthesis. Based on the rationale, XoMCAT has been considered as a target for antibacterial agents against BB. Protein-protein interaction between XoMCAT and ACP was also extensively investigated using computational docking, and the proposed model revealed that ACP bound to the cleft between two XoMCAT subdomains.
Keywords:acyl carrier protein  computational docking  fatty acid synthesis  malonyl CoA-acyl carrier protein transacylase  Xanthomanous oryzae pv  oryzae
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