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A new middle repetitive sequence of Nicotiana plumbaginifolia genome
Authors:Yelena V Kovtun  Igor K Komarnitsky  Yuri Yu Gleba
Institution:(1) Institute of Cell Biology and Genetic Engineering, Zabolotnogo St. 148, 252143 Kiev, Ukraine;(2) Present address: Department of Botany, The University of Wisconsin-Madison, 132 Birge Hall, 430 Lincoln Dr., 53706 Madison, WI, USA
Abstract:A middle repetitive sequence NPR18 was isolated from Nicotiana plumbaginifolia nuclear genome 8]. Sequences homologous to the repeat are dispersed through genomes of several Nicotiana species. compute-assisted data analysis of NPR18 primary sequence reveals several features attributed to mobile genetic elements: an AT content higher than average for nuclear DNA of genus Nicotiana plants; a number of direct and inverted repeats. Some of the repeats displayed homology to the terminal and subterminal repeats of Ac/Ds-like plant elements.
Keywords:nuclear genome  repeated DNA  DNA sequence  Nicotiana plumbaginifolia  transposable element
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