Fast protein block searches |
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| Authors: | Fuchs R. |
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| Affiliation: | EMBL Data Library, European Molecular Biology Laboratory Postfach 10.2209, 69012 Heidelberg, Germany |
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| Abstract: | Profile searches using aligned short protein blocks are an effectivemethod for identifying putative protein functions. An algorithmis presented that accelerates block searches by a factor 25with only limited lack of sensitivity: this algorithm is particularlysuited for application in large-scale genome research. |
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