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Improving probabilistic infectious disease forecasting through coherence
Authors:Graham Casey Gibson  Kelly R Moran  Nicholas G Reich  Dave Osthus
Institution:1. Statistical Sciences Group, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America ; 2. Department of Biostatistics and Epidemiology, University of Massachusetts-Amherst, Amherst, Massachusetts, United States of America ; 3. Department of Statistical Science, Duke University, Durham, North Carolina, United States of America ; Institute for Disease Modeling, UNITED STATES
Abstract:With an estimated $10.4 billion in medical costs and 31.4 million outpatient visits each year, influenza poses a serious burden of disease in the United States. To provide insights and advance warning into the spread of influenza, the U.S. Centers for Disease Control and Prevention (CDC) runs a challenge for forecasting weighted influenza-like illness (wILI) at the national and regional level. Many models produce independent forecasts for each geographical unit, ignoring the constraint that the national wILI is a weighted sum of regional wILI, where the weights correspond to the population size of the region. We propose a novel algorithm that transforms a set of independent forecast distributions to obey this constraint, which we refer to as probabilistically coherent. Enforcing probabilistic coherence led to an increase in forecast skill for 79% of the models we tested over multiple flu seasons, highlighting the importance of respecting the forecasting system’s geographical hierarchy.
Keywords:
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