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A High-Throughput Platform for Screening Milligram Quantities of Plant Biomass for Lignocellulose Digestibility
Authors:Nicholas Santoro  Shane L. Cantu  Carl-Erik Tornqvist  Tanya G. Falbel  Jenny L. Bolivar  Sara E. Patterson  Markus Pauly  Jonathan D. Walton
Affiliation:1. Department of Energy Great Lakes Bioenergy Research Center, Michigan State University, 162 Food and Safety Toxicology Building, East Lansing, MI, 48824-1312, USA
2. Department of Energy Great Lakes Bioenergy Research Center, Department of Horticulture, University of Wisconsin, Madison, WI, 53706, USA
3. Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA
4. Department of Plant and Microbial Biology, University of California, Berkeley, 94720, USA
Abstract:The development of a viable lignocellulosic ethanol industry requires multiple improvements in the process of converting biomass to ethanol. A key step is the improvement of the plants that are to be used as biomass feedstocks. To facilitate the identification and evaluation of feedstock plants, it would be useful to have a method to screen large numbers of individual plants for enhanced digestibility in response to combinations of specific pretreatments and enzymes. This paper describes a high-throughput digestibility platform (HTDP) for screening collections of germplasm for improved digestibility, which was developed under the auspices of the Department of Energy-Great Lakes Bioenergy Research Center (DOE-GLBRC). A key component of this platform is a custom-designed workstation that can grind and dispense 1–5 mg quantities of more than 250 different plant tissue samples in 16 h. The other steps in the processing (pretreatment, enzyme digestion, and sugar analysis) have also been largely automated and require 36 h. The process is adaptable to diverse acidic and basic, low-temperature pretreatments. Total throughput of the HTDP is 972 independent biomass samples per week. Validation of the platform was performed on brown midrib mutants of maize, which are known to have enhanced digestibility. Additional validation was performed by screening approximately 1,200 Arabidopsis mutant lines with T-DNA insertions in genes known or suspected to be involved in cell wall biosynthesis. Several lines showed highly significant (p?
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