Binding of VIVO2+ to the Fe binding sites of human serum transferrin. A theoretical study |
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Authors: | Gonçalo C. Justino Eugenio Garribba João Costa Pessoa |
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Affiliation: | 1. Centro Química Estrutural, Instituto Superior Técnico, Universidade Técnica de Lisboa, Av. Rovisco Pais, 1049-001, Lisbon, Portugal 2. Dipartimento di Chimica e Farmacia, and Centro Interdisciplinare per lo Sviluppo della Ricerca Biotecnologica e per lo Studio della Biodiversità della Sardegna, Università di Sassari, Via Vienna 2, 07100, Sassari, Italy
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Abstract: | The binding of VIVO2+ to human serum transferrin (hTF) at the FeIII binding sites is addressed. Geometry optimization calculations were performed for the binding of VIVO2+ to the N-terminal lobe of hTF (hTFN), and indicate that in the presence of CO3 2? or HCO3 ?, VIV is bound to five atoms in a distorted geometry. The structures of VIVO–hTFN species optimized at the semiempirical level were also used to calculate the 51V and 14N A tensors by density functional theory methods, and were compared with the reported experimental values. Globally, of all the calculated VIVO–hTF structures, the one that yields the lowest calculated heats of formation and minimum deviations from the experimental values of the 51V and 14N A tensor components is the structure that includes CO3 2? as a synergistic anion. In this structure the V=O bond length is approximately 1.6 Å, and the vanadium atom is also coordinated to the phenolate oxygen atom of Tyr188 (at approximately 1.9 Å), the aspartate oxygen atom of Asp63 (at approximately 1.9 Å), the His249 Nτ atom (at approximately 2.1 Å), and a carbonate oxygen atom (at approximately 1.8 Å). The Tyr95 phenolic ocygen atom is approximately 3.3 Å from the metal center, and thus is very weakly bound to VIV. All of these oxygen atoms are able to establish dipolar interactions with groups of the protein. |
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