Biochemistry of Methanogenesis

Abstract

Methane is a product of the energy-yielding pathways of the largest and most phylogenetically diverse group in the Archaea. These organisms have evolved three pathways that entail a novel and remarkable biochemistry. All of the pathways have in common a reduction of the methyl group of methyl-coenzyme M (CH₃-S-CoM) to CH₄. Seminal studies on the CO₂-reduction pathway have revealed new cofactors and enzymes that catalyze the reduction of CO₂ to the methyl level (CH₃-S-CoM) with electrons from H₂ or formate. Most of the methane produced in nature originates from the methyl group of acetate. CO dehydrogenase is a key enzyme catalyzing the decarbonylation of acetyl-CoA; the resulting methyl group is transferred to CH₃-S-CoM, followed by reduction to methane using electrons derived from oxidation of the carbonyl group to CO₂ by the CO dehydrogenase. Some organisms transfer the methyl group of methanol and methylamines to CH₃-S-CoM; electrons for reduction of CH₃-S-CoM to CH₄ are provided by the oxidation of methyl groups to CO₂.