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Real-time PCR versus conventional PCR for malaria parasite detection in low-grade parasitemia
Authors:Gama Bianca E  Silva-Pires Felipe do E S  Lopes Mauro N'Kruman R  Cardoso Maria Angélica B  Britto Constança  Torres Kátia L  de Mendonça Lima Leila  de Souza José Maria  Daniel-Ribeiro Cláudio T  Ferreira-da-Cruz Maria de Fátima
Institution:Laboratory of Malaria Research, Department of Immunology, Oswaldo Cruz Institute, Fiocruz, Rio de Janeiro, Brazil.
Abstract:We have optimized a faster and cheaper real-time PCR and developed a conventional genus specific PCR based on 18S rRNA gene to detect malaria parasites in low-grade parasitemias. Additionally, we compared these PCRs to the OptiMAL-IT test. Since there is no consensus on choice of standard quantitative curve in real-time assays, we decided to investigate the performance of parasite DNA from three different sources: "genome", amplicon and plasmid. The amplicon curve showed the best efficiency in quantifying parasites. Both PCR assays detected 100% of the clinical samples tested; the sensitivity threshold was 0.5 parasite/mul and no PCR positive reaction occurred when malaria parasites were not present. Conversely, if OptiMAL-IT were employed for malaria diagnosis, 30% of false-negative results could be expected. We conclude that PCR assays have potential for detecting malaria parasites in asymptomatic infections, in evaluation of malaria vaccine molecule candidates, for screening blood donors, especially in endemic areas, or even in monitoring malaria therapy.
Keywords:Malaria  Diagnosis  Real-time PCR  real-time polymerase chain reaction  PCR  polymerase chain reaction  DNA  deoxyribonucleic acid  dNTPs  deoxyribonucleotide triphosphates  EDTA  ethylenediaminetetraacetic acid  CT  threshold cycle  R2  determination coefficient  rRNA  ribosomal ribonucleic acid  FAM?  6-carboxy-fluoroscein  TAMRA?  N  N  N  N-tetramethyl-6-carboxy-rhodamine  bp  base pair number  nM  nanomolar  TBS  thick blood smears  RBC  red blood cells  WBC  white blood cells
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