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Phylogeny and Classification of Prunus sensu lato (Rosaceae)
作者姓名:Shuo Shi  Jinlu Li  Jiahui Sun  Jing Yu  Shiliang Zhou
作者单位:[1]State Key Laboratory of Systematic and Evolutionary BotanY, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China [2]University of Chinese Acaclemy of Sciences, Beijing'100043, China [3]College Of Landscape Architecture, Northeast Forestry University, Harbin 150040, China
基金项目:This study was supported partly by National Natural Science Foundation of China (31270239) and the National High-tech R&D Program (863 Program, 2012AA021602).
摘    要:The classification of the economically important genus Prunus L. sensu lato (s.L) is controversial due to the high levels of convergent or the parallel evolution of morphological characters. In the present study, phylogenetic analyses of fifteen main segregates of Prunus s.I. represented by eighty-four species were conducted with maximum parsimony and Bayesian approaches using twelve chloroplast regions (atpB- rbcL, matK, ndhF, psbA-trnH, rbcL, rpL 16, rpoC1, rps16, trnS-G, trnL, trnL-F and ycfl) and three nuclear genes (ITS, s6pdh and Sbel) to explore their infrageneric used to develop a new, phylogeny-based classification relationships. The results of these analyses were of Prunus s.I. Our phylogenetic reconstructions resolved three main clades of Prunus s.I. with strong supports. We adopted a broad-sensed genus, Prunus, and recognised three subgenera corresponding to the three main clades: subgenus Padus, subgenus Cerasus and subgenus Prunus. Seven sections of subgenus Prunus were recognised. The dwarf cherries, which were previously assigned to subgenus Cerasus, were included in this subgenus Prunus. One new section name, Prunus L. subgenus Prunus section Persicae (T. T. yu & L. T. Lu) S. L. Zhou and one new species name, Prunus tianshanica (Pojarkov) S. Shi, were proposed.

关 键 词:系统发育  矮樱桃  分类  蔷薇科  rbcL基因  trnL-F  贝叶斯方法  最大简约法
收稿时间:2013-03-28

Phylogeny and Classification of Prunus sensu lato (Rosaceae)
Authors:Shuo Shi  Jinlu Li  Jiahui Sun  Jing Yu  Shiliang Zhou
Institution:1.State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, the Chinese Academy of Sciences, Beijing, China;2.University of Chinese Academy of Sciences, Beijing, China;3.College of Landscape Architecture, Northeast Forestry University, Harbin, China
Abstract:The classification of the economically important genus Prunus L. sensu lato (s.l.) is controversial due to the high levels of convergent or the parallel evolution of morphological characters. In the present study, phylogenetic analyses of fifteen main segregates of Prunus s.l. represented by eighty-four species were conducted with maximum parsimony and Bayesian approaches using twelve chloroplast regions (atpB-rbcL, matK, ndhF, psbA-trnH, rbcL, rpL16, rpoC1, rps16, trnS-G, trnL, trnL-F and ycf1) and three nuclear genes (ITS, s6pdh and SbeI) to explore their infrageneric relationships. The results of these analyses were used to develop a new, phylogeny-based classification of Prunus s.l. Our phylogenetic reconstructions resolved three main clades of Prunus s.l. with strong supports. We adopted a broad-sensed genus, Prunus, and recognised three subgenera corresponding to the three main clades: subgenus Padus, subgenus Cerasus and subgenus Prunus. Seven sections of subgenus Prunus were recognised. The dwarf cherries, which were previously assigned to subgenus Cerasus, were included in this subgenus Prunus. One new section name, Prunus L. subgenus Prunus section Persicae (T. T. Yü & L. T. Lu) S. L. Zhou and one new species name, Prunus tianshanica (Pojarkov) S. Shi, were proposed.
Keywords:Amygdaloideae  phylogeny  Prunoideae  Prunus  taxonomy
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