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Circular RNA-associated ceRNA network involved in HIF-1 signalling in triple-negative breast cancer: circ_0047303 as a potential key regulator
Authors:Farzaneh Darbeheshti  Mojdeh Mahdiannasser  Zahra Noroozi  Zahra Firoozi  Behnam Mansoori  Abdolreza Daraei  Milad Bastami  Ziba Nariman-Saleh-Fam  Elahe Valipour  Yaser Mansoori
Affiliation:1. Department of Medical Genetics, Fasa University of Medical Sciences, Fasa, Iran;2. Department of Genetics, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran

Contribution: Visualization (supporting), Writing - original draft (lead);3. Department of Molecular Medicine, School of Advanced Technologies in Medicine, Tehran University of Medical Sciences, Tehran, Iran

Contribution: ​Investigation (equal);4. Department of Medical Genetics, Fasa University of Medical Sciences, Fasa, Iran

Contribution: ​Investigation (equal);5. Department of General Surgery, Fasa University of Medical Sciences, Fasa, Iran

Contribution: Resources (equal);6. Department of Medical Genetics, School of Medicine, Babol University of Medical Sciences, Babol, Iran

Contribution: Validation (equal);7. Noncommunicable Diseases Research Center, Fasa University of Medical Sciences, Fasa, Iran

Contribution: Formal analysis (equal);8. Women's Reproductive Health Research Center, Tabriz University of Medical Sciences, Tabriz, Iran

Contribution: Writing - review & editing (equal);9. Department of Genetics, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran

Contribution: Visualization (supporting)

Abstract:The aggressive and highly metastatic nature of triple-negative breast cancer (TNBC) causes patients to suffer from the poor outcome. HIF-1 signalling pathway is a prominent pathway that contributes to angiogenesis and metastasis progression in tumours. On the contrary, the undeniable importance of circular RNAs (circRNAs) as multifunctional non-coding RNAs (ncRNAs) has been identified in breast cancer. These ncRNAs owing to their high stability and specificity have been becoming a hotspot in cancer researches. circRNAs act as competing endogenous RNAs (ceRNAs) and compete with mRNAs for shared miRNAs, thus modulate gene expression. Since the most dysregulated biological functions in TNBC are associated with cellular invasion, understanding the molecular pathogenesis of these processes is a crucial step towards the development of new treatment approaches. The purpose of this study is to undermine the circRNA-associated ceRNA network involved in HIF-1 signalling in TNBC using an integrative bioinformatics approach. In the next step, the novel circ_0047303-mediated ceRNA regulatory axes have been extracted and validated across TNBC samples. We show that circ_0047303 has the highest degree in the circRNA-associated ceRNA network and shows a significant up-expression in TNBC. Moreover, our results suggest that circ_0047303 could mediate the upregulation of key angiogenesis-related genes, including HIF-1, EIF4E2 and VEGFA in TNBC through sponging the tumour-suppressive miRNAs. The circ_0047303 could be a promising molecular biomarker and/or therapeutic target for TNBC.
Keywords:angiogenesis  ceRNA network  circ_0047303  HIF-1 signalling  microarray  triple-negative breast cancer
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